{
  "_id": "6a12b36dacfb0bcc41d19f53",
  "Package": "CITMIC",
  "Type": "Package",
  "Title": "Estimation of Cell Infiltration Based on Cell Crosstalk",
  "Version": "0.1.1",
  "Maintainer": "Junwei Han <hanjunwei1981@163.com>",
  "Authors@R": "c(person(given = \"Junwei\", family = \"Han\", email = \"hanjunwei1981@163.com\", role  = c(\"aut\", \"cre\", \"cph\")),\nperson(given = \"Xilong\", family = \"Zhao\", role  = \"aut\")\n)",
  "Description": "A systematic biology tool was developed to identify cell\ninfiltration via an Individualized Cell crosstalk network.\n'CITMIC' first constructed a weighted cell crosstalk network by\nintegrating Cell-target interaction information, biological\nprocess data from the Gene Ontology (GO) database, and gene\ntranscriptomic data in a specific sample, and then, it used a\nnetwork propagation algorithm on the network to identify cell\ninfiltration for the sample. Ultimately, cell infiltration in\nthe patient dataset was obtained by normalizing the centrality\nscores of the cells.",
  "License": "GPL (>= 2)",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.2.3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libglpk-dev libxml2-dev",
  "Repository": "https://hanjunwei-lab.r-universe.dev",
  "Date/Publication": "2024-09-26 06:53:30 UTC",
  "RemoteUrl": "https://github.com/hanjunwei-lab/citmic",
  "RemoteRef": "HEAD",
  "RemoteSha": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-24 08:12:04 UTC",
    "User": "root"
  },
  "Author": "Junwei Han [aut, cre, cph],\nXilong Zhao [aut]",
  "MD5sum": "43a397f45f9723ad56050688a345fa34",
  "_user": "hanjunwei-lab",
  "_type": "src",
  "_file": "CITMIC_0.1.1.tar.gz",
  "_fileid": "6d292cb73520c7d9908b442f69c035ba79acd8ce612383148a555ad8992aa84c",
  "_filesize": 15296967,
  "_sha256": "6d292cb73520c7d9908b442f69c035ba79acd8ce612383148a555ad8992aa84c",
  "_created": "2026-05-24T08:12:04.000Z",
  "_published": "2026-05-24T08:14:37.796Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77582819792,
      "time": 122,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7183562112"
    },
    {
      "job": 77582819765,
      "time": 118,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7183561738"
    },
    {
      "job": 77582819758,
      "time": 67,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7183556904"
    },
    {
      "job": 77582819752,
      "time": 93,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7183559426"
    },
    {
      "job": 77582645956,
      "time": 186,
      "config": "source",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7183550230"
    },
    {
      "job": 77582819750,
      "time": 112,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7183561103"
    },
    {
      "job": 77582819777,
      "time": 74,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7183557462"
    },
    {
      "job": 77582819779,
      "time": 76,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7183557768"
    },
    {
      "job": 77582819800,
      "time": 100,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7183560130"
    }
  ],
  "_buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609",
  "_status": "failure",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/hanjunwei-lab/citmic",
  "_commit": {
    "id": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
    "author": "zhaopapers <138082329+zhaopapers@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Rename NAMESPAC to NAMESPACE",
    "time": 1727333610
  },
  "_maintainer": {
    "name": "Junwei Han",
    "email": "hanjunwei1981@163.com",
    "login": "hanjunwei-lab",
    "description": "Junwei Han is a professor in Harbin Medical University. His research is in the areas of bioinformatics and computational systems biology.",
    "uuid": 60877533
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "fastmatch",
      "role": "Imports"
    },
    {
      "package": "igraph",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "hanjunwei-lab",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "zhaopapers",
      "count": 125,
      "uuid": 138082329
    }
  ],
  "_userbio": {
    "uuid": 60877533,
    "type": "user",
    "name": "Junwei Han",
    "description": "Junwei Han is a professor in Harbin Medical University. His research is in the areas of bioinformatics and computational systems biology."
  },
  "_downloads": {
    "count": 203,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CITMIC"
  },
  "_devurl": "https://github.com/hanjunwei-lab/citmic",
  "_searchresults": 5,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/CITMIC.html",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/hanjunwei-lab/citmic",
  "_realowner": "hanjunwei-lab",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2024-06-14"
    },
    {
      "version": "0.1.1",
      "date": "2024-09-17"
    },
    {
      "version": "0.1.2",
      "date": "2024-11-08"
    },
    {
      "version": "0.1.3",
      "date": "2025-10-15"
    }
  ],
  "_exports": [
    "CITMIC",
    "GetData_CITMIC"
  ],
  "_datasets": [
    {
      "name": "CITMIC_Data",
      "title": "An environment variable that includes some example data",
      "object": "CITMIC_Data",
      "class": [
        "environment"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "CITMIC",
      "title": "CITMIC",
      "topics": [
        "CITMIC"
      ]
    },
    {
      "page": "CITMIC_Data",
      "title": "An environment variable that includes some example data",
      "topics": [
        "CITMIC_Data"
      ]
    },
    {
      "page": "GetData_CITMIC",
      "title": "GetData_CITMIC",
      "topics": [
        "GetData_CITMIC"
      ]
    }
  ],
  "_readme": "https://github.com/hanjunwei-lab/citmic/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "fastmatch",
    "glue",
    "igraph",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "pkgconfig",
    "rlang",
    "vctrs"
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "citmic",
  "_universes": [
    "hanjunwei-lab"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-24T08:14:09.000Z",
      "distro": "noble",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "9248f862a7249c45438373566677deb10eedb13e1b2e9e0598224756014a3c06",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-24T08:14:07.000Z",
      "distro": "noble",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "bbd9cf4cd0b469b3c9502c898b8db5f13517f8a2f06049064ba82401571b0389",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-24T08:13:22.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "7db4f0cceb1ac218dc14edc7c306e98fbd7f6d2f9f3364cad747aac505d51aa0",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-24T08:13:45.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "280fcb7d1f306204a47373a2b8dd17986b0d07d20f10c0d206128354b57f22bc",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-05-24T08:14:13.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "46050aab3473f5ca1b9458377f171ff3bb0a4283039949a2f641e0bfd7b2efae",
      "status": "success",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-24T08:13:17.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "f8721bbfb98d04fd047fdb6f0d1b4fecad5682e0dd6db964d1ef34dd66350dcd",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-24T08:13:21.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "8b48e37afd324cdbeb815ed80e868db17535a51ccc1cdac15686b347bd17443d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-24T08:13:42.000Z",
      "commit": "fc6ea713d92d876d1cc10c97307736a6c7c628bb",
      "fileid": "69cab72b320ca1124c14bb3485168ada73e9b116597b56999245e9f7ddb16805",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/hanjunwei-lab/actions/runs/26355969609"
    }
  ]
}