Package: DrugSim2DR 0.1.1

DrugSim2DR: Predict Drug Functional Similarity to Drug Repurposing

A systematic biology tool was developed to repurpose drugs via a drug-drug functional similarity network. 'DrugSim2DR' first predict drug-drug functional similarity in the context of specific disease, and then using the similarity constructed a weighted drug similarity network. Finally, it used a network propagation algorithm on the network to identify drugs with significant target abnormalities as candidate drugs.

Authors:Junwei Han [aut, cre, cph], Ji Li [aut], Jiashuo Wu [aut]

DrugSim2DR_0.1.1.tar.gz
DrugSim2DR_0.1.1.zip(r-4.7)DrugSim2DR_0.1.1.zip(r-4.6)DrugSim2DR_0.1.1.zip(r-4.5)
DrugSim2DR_0.1.1.tgz(r-4.6-any)DrugSim2DR_0.1.1.tgz(r-4.5-any)
DrugSim2DR_0.1.1.tar.gz(r-4.7-any)DrugSim2DR_0.1.1.tar.gz(r-4.6-any)
DrugSim2DR_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
DrugSim2DR/json (API)

# Install 'DrugSim2DR' in R:
install.packages('DrugSim2DR', repos = c('https://hanjunwei-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hanjunwei-lab/drugsim2dr/issues

Datasets:
  • myenv - An environment variable which includes some example data

On CRAN:

Conda:

4.00 score 2 stars 2 scripts 162 downloads 7 exports 84 dependencies

Last updated from:697888f5bb. Checks:7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64WARNING187
source / vignettesOK332
linux-release-x86_64WARNING181
macos-release-arm64WARNING168
macos-oldrel-arm64WARNING117
windows-develWARNING129
windows-releaseWARNING136
windows-oldrelWARNING125
wasm-releaseOK149

Exports:CalDEscoreDrugRepositionDrugSimscoreGettestplotDruglinkplotDrugstructureplotTargetheatmap

Dependencies:askpassbase64encBHBiocGenericsbitopsbslibcachemChemmineRclicpp11crosstalkcurlDBIdigestdplyrDTevaluatefarverfastmapfastmatchfontawesomefsgenericsggplot2gluegridExtragtablehighrhtmltoolshtmlwidgetshttrigraphisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMatrixmemoisemimeopensslotelpheatmappillarpkgconfigplyrpngpromisespurrrR6rappdirsRColorBrewerRcppRCurlreshape2rjsonrlangrmarkdownrsvgrvestS7sassscalesselectrspstringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxml2yaml

DrugSim2DR User Guide

Ji Li, Jiashuo Wu, JunweiHan

Rendered fromDrugSim2DR.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2023-08-02
Started: 2023-08-02